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How Is Merkel Cell Carcinoma Diagnosed and Staged?

Biopsy, immunostains, imaging, and what the stage means for your plan

Medically reviewed by Dr. Steven Q. Wang, MDLast reviewed

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Introduction

Merkel cell carcinoma (MCC) is notorious for looking harmless. It often resembles a cyst, a stye, an insect bite, or an ordinary pink bump, which is why the diagnosis is frequently a surprise. Because MCC can move quickly, a clear diagnostic and staging work-up in the first few weeks sets the direction for everything that follows.

This guide walks through how the diagnosis is confirmed under the microscope, why imaging and lymph node testing are almost always part of the picture, and how all of that information comes together into a stage that shapes your treatment plan.

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Step 1: Confirming the Diagnosis

Skin biopsy

The diagnosis starts with a biopsy — removing all or part of the lump so a pathologist can examine it. Under the microscope, MCC shows small, round, blue-staining cells with features of a neuroendocrine tumor. Because these cells can resemble other small-round-cell cancers, appearance alone is not enough to be certain.

Immunostains

Pathologists apply special stains that tag particular proteins. MCC characteristically stains positive for cytokeratin 20 (CK20) in a dot-like pattern and for neuroendocrine markers, while staining negative for TTF-1, a marker of small-cell lung cancer. This panel is what distinguishes MCC from a skin metastasis of a lung tumor or from lymphoma. Many centers also test the tumor for the Merkel cell polyomavirus.

The pathology report

Once MCC is confirmed, the report describes the tumor's size, how deeply it extends, whether it reaches the edges of the removed tissue (margins), and whether cancer is seen inside small blood or lymphatic vessels (lymphovascular invasion). These details feed directly into staging and surgical planning.

Step 2: Checking the Lymph Nodes

MCC spreads to regional lymph nodes early, and often before those nodes are large enough to feel. Two tools address this:

  • •Examination and ultrasound of the lymph node basin that drains the tumor site.
  • •Sentinel lymph node biopsy (SLNB) — a same-day surgical procedure, usually done at the time the primary tumor is widely removed, that samples the first node(s) the tumor would drain into. Roughly a third of people with a clinically normal exam have microscopic cancer found this way, which changes the stage and the plan. See why sentinel lymph node biopsy is routine for MCC.

Step 3: Imaging

Most people with newly diagnosed MCC have baseline imaging — commonly a whole-body PET/CT, or CT of the chest, abdomen, and pelvis, sometimes with brain MRI. Imaging looks for disease in lymph nodes and distant organs that the exam cannot reach, and it creates a baseline that later scans are compared against. Imaging findings can raise the stage, but a biopsy is still needed to confirm anything suspicious before it is called metastatic disease.

How the Stage Is Assigned

MCC uses the American Joint Committee on Cancer (AJCC) staging system, which combines the primary tumor (T), lymph nodes (N), and distant spread (M). In plain terms:

  • •Stage I–II: The cancer is confined to the skin, with no evidence of lymph node or distant spread. Stage II generally means a larger primary tumor or one that invades nearby structures such as muscle, cartilage, or bone.
  • •Stage III: The cancer has reached regional lymph nodes — whether found by biopsy of normal-feeling nodes, on a scan, or by physical exam. A small group also has "unknown primary" MCC, where nodal disease is found but no skin tumor is identified.
  • •Stage IV: The cancer has spread to distant skin, lymph nodes, or organs such as the liver, lung, bone, or brain. See advanced or metastatic MCC and checkpoint immunotherapy.

Staging also distinguishes clinical stage (based on exam and imaging) from pathologic stage (which adds what surgery and lymph node biopsy reveal). Pathologic staging is more accurate, which is one reason SLNB matters so much in MCC.

What to Ask Your Doctor

  1. What did my biopsy and immunostains show, and was the tumor tested for the Merkel cell polyomavirus?
  2. Will I have a sentinel lymph node biopsy, and when — before, during, or after removing the primary tumor?
  3. What imaging will I have for staging, and will you use PET/CT or CT?
  4. What is my clinical stage now, and could it change after surgery and node results?
  5. Will my case be reviewed by a multidisciplinary team experienced with MCC?
  6. Should I get a second opinion on the pathology at a center that sees MCC often?

Conclusion

Diagnosing and staging MCC takes a coordinated sequence: a biopsy with immunostains to confirm what it is, lymph node evaluation (usually including a sentinel node biopsy) to see whether it has started to travel, and imaging to check for disease farther away. The resulting stage is the single best predictor of what to expect and the foundation of the treatment plan.

Because MCC is rare, ask whether your care can be coordinated by a team that treats it regularly — experience genuinely matters here.

Sources

Clinical Guidelines & Peer-Reviewed Literature

  • Coggshall K, Tello TL, North JP, Yu SS. Merkel cell carcinoma: An update and review: Pathogenesis, diagnosis, and staging. J Am Acad Dermatol. 2018;78(3):433-442. PubMed
  • Harms KL, Healy MA, Nghiem P, et al. Analysis of Prognostic Factors from 9387 Merkel Cell Carcinoma Cases Forms the Basis for the New 8th Edition AJCC Staging System. Ann Surg Oncol. 2016;23(11):3564-3571. PubMed
  • Bichakjian CK, Olencki T, Aasi SZ, et al. Merkel Cell Carcinoma, Version 1.2018, NCCN Clinical Practice Guidelines in Oncology. J Natl Compr Canc Netw. 2018;16(6):742-774. PubMed
  • Schmults CD, Blitzblau R, Aasi SZ, et al. NCCN Guidelines® Insights: Merkel Cell Carcinoma, Version 1.2024. J Natl Compr Canc Netw. 2024;22(1D):e240002. PubMed

Patient Resources

Disclaimer: Educational only. Not a substitute for professional medical advice. Always consult your dermatologist or oncologist about your personal diagnosis and treatment plan.

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